RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g24060.1 View Network Show in Genome Browser |
| Other Names | Os03g0356484 |
| Description | tetratricopeptide repeat containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13659385-13662772 Nucleotide Length: 522 |
| Protein-coding | LOC_Os03g24060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21460 LOC_Os01g69130 LOC_Os02g55980 LOC_Os01g66720 LOC_Os02g09940 LOC_Os01g44130 |
| Downstream Genes | LOC_Os06g14620 LOC_Os06g03720 LOC_Os04g41960 LOC_Os06g42000 LOC_Os03g56944 LOC_Os04g38450 LOC_Os04g31190 LOC_Os11g40150 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g24060.1 |
| Rice Genome Annotation | LOC_Os03g24060.1 |
| Ricechip | LOC_Os03g24060.1 |
| KEGG | osa:9266461 dosa:Os03t0356484-01 |
| Entrez-Gene | 9266461 |