RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g24180.1 View Network Show in Genome Browser |
| Other Names | Os03g0356638 |
| Description | pleckstrin homology domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 13727326-13738852 Nucleotide Length: 2625 |
| Protein-coding | LOC_Os03g24180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45600 LOC_Os01g49200 LOC_Os01g63800 LOC_Os02g50550 LOC_Os02g20850 LOC_Os02g42134 LOC_Os02g58730 LOC_Os02g02840 LOC_Os02g50860 LOC_Os01g12900 LOC_Os01g16220 More.. |
| Downstream Genes | LOC_Os12g34840 LOC_Os07g30300 LOC_Os05g51710 LOC_Os03g46340 LOC_Os12g18770 LOC_Os03g49770 LOC_Os09g33600 LOC_Os05g29050 LOC_Os10g33930 LOC_Os10g31770 LOC_Os10g41060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g24180.1 |
| Rice Genome Annotation | LOC_Os03g24180.1 |
| Ricechip | LOC_Os03g24180.1 |
| KEGG | osa:9271710 dosa:Os03t0356638-00 |
| Entrez-Gene | 9271710 |