RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g24580.2 View Network Show in Genome Browser |
| Other Names | Os03g0360500 |
| Description | transmembrane protein 85, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14000483-14003985 Nucleotide Length: 456 |
| Protein-coding | LOC_Os03g24580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05694 LOC_Os01g05744 LOC_Os01g05720 LOC_Os01g05710 LOC_Os02g07750 |
| Downstream Genes | LOC_Os04g20280 LOC_Os03g56820 LOC_Os12g43363 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g24580.2 |
| Rice Genome Annotation | LOC_Os03g24580.2 |
| Ricechip | LOC_Os03g24580.2 |
| KEGG | osa:4332886 dosa:Os03t0360500-01 |
| Entrez-Gene | 4332886 |