RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g24870.1 View Network Show in Genome Browser |
| Other Names | Os03g0363600 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14165549-14170408 Nucleotide Length: 1548 |
| Protein-coding | LOC_Os03g24870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16260 LOC_Os01g17214 LOC_Os01g65500 LOC_Os02g35190 LOC_Os02g44730 LOC_Os01g22710 |
| Downstream Genes | LOC_Os12g03860 LOC_Os11g05390 LOC_Os11g04030 LOC_Os11g04020 LOC_Os11g04104 LOC_Os12g03899 LOC_Os12g03830 LOC_Os12g03870 LOC_Os11g04060 LOC_Os11g04150 LOC_Os08g20570 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00260 rn01100 rn01120 |
| Metacyc Pathways | PWY-702 HOMOSER-THRESYN-PWY PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g24870.1 |
| Rice Genome Annotation | LOC_Os03g24870.1 |
| Ricechip | LOC_Os03g24870.1 |
| KEGG | osa:4332901 dosa:Os03t0363600-01 |
| Entrez-Gene | 4332901 |