RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g24890.2 View Network Show in Genome Browser |
| Other Names | Os03g0363800 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14176397-14181042 Nucleotide Length: 717 |
| Protein-coding | LOC_Os03g24890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01180 LOC_Os02g42550 LOC_Os02g57630 LOC_Os02g40900 LOC_Os02g49820 LOC_Os02g51890 LOC_Os03g17060 LOC_Os01g42820 LOC_Os03g01970 LOC_Os01g71200 LOC_Os03g04780 More.. |
| Downstream Genes | LOC_Os04g41490 LOC_Os06g45910 LOC_Os06g45900 LOC_Os05g43374 LOC_Os07g33340 LOC_Os09g19940 LOC_Os07g46820 LOC_Os08g40880 LOC_Os08g45240 LOC_Os07g42380 LOC_Os11g45590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g24890.2 |
| Rice Genome Annotation | LOC_Os03g24890.2 |
| Ricechip | LOC_Os03g24890.2 |
| KEGG | osa:4332903 dosa:Os03t0363800-01 |
| Entrez-Gene | 4332903 |