RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25120.1 View Network Show in Genome Browser |
| Other Names | Os03g0366800 |
| Description | HSF-type DNA-binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14342679-14345575 Nucleotide Length: 918 |
| Protein-coding | LOC_Os03g25120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69920 LOC_Os03g17700 LOC_Os02g53770 LOC_Os02g44500 LOC_Os02g33450 LOC_Os02g50480 LOC_Os01g27160 LOC_Os02g04810 LOC_Os02g24612 LOC_Os01g14950 LOC_Os01g61550 More.. |
| Downstream Genes | LOC_Os06g06090 LOC_Os11g18170 LOC_Os03g58160 LOC_Os03g50860 LOC_Os03g51550 LOC_Os10g21810 LOC_Os04g14680 LOC_Os07g38430 LOC_Os04g38610 LOC_Os07g08840 LOC_Os03g58630 More.. |
| Reference | |
|---|---|
| PubMed | 21792744 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25120.1 |
| Rice Genome Annotation | LOC_Os03g25120.1 |
| Ricechip | LOC_Os03g25120.1 |
| KEGG | osa:9271925 dosa:Os03t0366800-00 |
| Entrez-Gene | 9271925 |