RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25130.1 View Network Show in Genome Browser |
| Other Names | Os03g0366900 |
| Description | OB-fold nucleic acid binding domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14357771-14359171 Nucleotide Length: 483 |
| Protein-coding | LOC_Os03g25130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53680 LOC_Os02g46130 LOC_Os01g06020 LOC_Os03g11540 LOC_Os02g41470 LOC_Os02g58220 LOC_Os02g04700 LOC_Os02g42230 |
| Downstream Genes | LOC_Os03g38980 LOC_Os07g37720 LOC_Os07g30200 LOC_Os05g06260 LOC_Os07g37710 LOC_Os06g47830 LOC_Os05g02040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25130.1 |
| Rice Genome Annotation | LOC_Os03g25130.1 |
| Ricechip | LOC_Os03g25130.1 |
| KEGG | osa:4332917 dosa:Os03t0366900-01 |
| Entrez-Gene | 4332917 |