RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25140.1 View Network Show in Genome Browser |
| Other Names | Os03g0367000 |
| Description | peptidyl-prolyl isomerase PASTICCINO1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14359330-14370739 Nucleotide Length: 1899 |
| Protein-coding | LOC_Os03g25140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51570 LOC_Os02g02550 LOC_Os02g48620 LOC_Os01g70300 LOC_Os02g09840 LOC_Os02g55880 |
| Downstream Genes | LOC_Os07g30800 LOC_Os07g09040 LOC_Os04g36890 LOC_Os03g50080 LOC_Os07g04160 LOC_Os06g20320 LOC_Os07g03070 LOC_Os06g45340 LOC_Os09g32526 LOC_Os07g45280 LOC_Os07g20544 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25140.1 |
| Rice Genome Annotation | LOC_Os03g25140.1 |
| Ricechip | LOC_Os03g25140.1 |
| KEGG | osa:4332918 dosa:Os03t0367000-01 |
| Entrez-Gene | 4332918 |