RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25440.1 View Network Show in Genome Browser |
| Other Names | Os03g0370400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14543750-14544785 Nucleotide Length: 582 |
| Protein-coding | LOC_Os03g25440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02320 LOC_Os01g41340 LOC_Os02g03750 |
| Downstream Genes | LOC_Os04g37500 LOC_Os08g44270 LOC_Os08g28970 LOC_Os04g24600 LOC_Os04g54390 LOC_Os10g32020 LOC_Os03g51980 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25440.1 |
| Rice Genome Annotation | LOC_Os03g25440.1 |
| Ricechip | LOC_Os03g25440.1 |
| KEGG | osa:4332934 dosa:Os03t0370400-01 |
| Entrez-Gene | 4332934 |