RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25490.1 View Network Show in Genome Browser |
| Other Names | Os03g0371000 |
| Description | cytochrome P450 72A1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14559322-14561845 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os03g25490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os01g11340 LOC_Os01g11280 LOC_Os01g11270 LOC_Os03g20570 LOC_Os02g42350 LOC_Os01g50490 LOC_Os02g36030 LOC_Os01g27890 LOC_Os02g09190 LOC_Os02g36070 More.. |
| Downstream Genes | LOC_Os04g48460 LOC_Os06g03930 LOC_Os03g40600 LOC_Os03g39540 LOC_Os08g39694 LOC_Os05g25640 LOC_Os05g43910 LOC_Os05g51550 LOC_Os08g12760 LOC_Os04g51940 LOC_Os10g12080 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1866-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25490.1 |
| Rice Genome Annotation | LOC_Os03g25490.1 |
| Ricechip | LOC_Os03g25490.1 |
| KEGG | osa:4332938 dosa:Os03t0371000-01 |
| Entrez-Gene | 4332938 |