RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25600.1 View Network Show in Genome Browser |
| Other Names | Os03g0372500 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14656240-14664804 Nucleotide Length: 2934 |
| Protein-coding | LOC_Os03g25600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g37690 LOC_Os06g14080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2092-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25600.1 |
| Rice Genome Annotation | LOC_Os03g25600.1 |
| Ricechip | LOC_Os03g25600.1 |
| KEGG | osa:4332941 dosa:Os03t0372500-02 |
| Entrez-Gene | 4332941 |