RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25869.1 View Network Show in Genome Browser |
| Other Names | Os03g0375300 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14790130-14798028 Nucleotide Length: 1644 |
| Protein-coding | LOC_Os03g25869 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42234 LOC_Os01g58240 LOC_Os01g58270 LOC_Os01g58290 LOC_Os01g58280 LOC_Os02g17090 LOC_Os02g16940 LOC_Os02g17150 LOC_Os02g17080 LOC_Os02g47210 LOC_Os02g17060 More.. |
| Downstream Genes | LOC_Os03g37984 LOC_Os11g05690 LOC_Os04g03810 LOC_Os04g03796 LOC_Os04g03100 LOC_Os04g02980 LOC_Os09g36110 LOC_Os11g15520 LOC_Os08g23740 LOC_Os06g41880 LOC_Os12g06060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2930 osa-miR2093-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25869.1 |
| Rice Genome Annotation | LOC_Os03g25869.1 |
| Ricechip | LOC_Os03g25869.1 |
| KEGG | osa:9270360 dosa:Os03t0375300-02 |
| Entrez-Gene | 9270360 |