RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25920.1 View Network Show in Genome Browser |
| Other Names | Os03g0375966,Os03g0375900 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14836333-14839122 Nucleotide Length: 1500 |
| Protein-coding | LOC_Os03g25920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42234 LOC_Os01g71720 LOC_Os01g71700 LOC_Os01g71710 LOC_Os01g71760 LOC_Os01g71740 LOC_Os02g47210 LOC_Os01g58240 LOC_Os02g47940 LOC_Os01g58270 LOC_Os01g58290 More.. |
| Downstream Genes | LOC_Os11g05690 LOC_Os12g41890 LOC_Os12g06060 LOC_Os03g37984 LOC_Os04g48410 LOC_Os08g23440 LOC_Os03g51900 LOC_Os04g03810 LOC_Os04g03796 LOC_Os04g03100 LOC_Os04g02980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25920.1 |
| Rice Genome Annotation | LOC_Os03g25920.1 |
| Ricechip | LOC_Os03g25920.1 |
| KEGG | osa:4332954 dosa:Os03t0375966-00dosa:Os03t0375900-01 |
| Entrez-Gene | 9268590 |