RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g25960.1 View Network Show in Genome Browser |
| Other Names | Os03g0376600 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14866653-14868768 Nucleotide Length: 798 |
| Protein-coding | LOC_Os03g25960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05060 LOC_Os02g16709 LOC_Os01g61320 LOC_Os02g51480 LOC_Os02g04460 LOC_Os02g09150 LOC_Os03g04780 LOC_Os03g13760 LOC_Os02g01250 LOC_Os03g21940 LOC_Os03g14450 More.. |
| Downstream Genes | LOC_Os10g36860 LOC_Os09g21460 LOC_Os06g48600 LOC_Os11g02450 LOC_Os12g17910 LOC_Os04g33630 LOC_Os07g32590 LOC_Os06g39906 LOC_Os03g55720 LOC_Os05g49220 LOC_Os08g43320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g25960.1 |
| Rice Genome Annotation | LOC_Os03g25960.1 |
| Ricechip | LOC_Os03g25960.1 |
| KEGG | osa:4332957 dosa:Os03t0376600-01 |
| Entrez-Gene | 4332957 |