RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g26090.1 View Network Show in Genome Browser |
| Other Names | Os03g0378200 |
| Description | GPI-anchored wall transfer protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 14946645-14953481 Nucleotide Length: 1383 |
| Protein-coding | LOC_Os03g26090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12740 LOC_Os02g40870 LOC_Os03g14260 LOC_Os02g14290 LOC_Os02g58030 LOC_Os01g55820 LOC_Os02g47210 LOC_Os01g62244 LOC_Os02g35190 LOC_Os01g65500 LOC_Os03g17310 More.. |
| Downstream Genes | LOC_Os03g46750 LOC_Os04g51080 LOC_Os03g37984 LOC_Os04g55210 LOC_Os03g30830 LOC_Os03g59070 LOC_Os03g27970 LOC_Os08g20570 LOC_Os05g38550 LOC_Os12g30060 LOC_Os12g25200 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR7692-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g26090.1 |
| Rice Genome Annotation | LOC_Os03g26090.1 |
| Ricechip | LOC_Os03g26090.1 |
| KEGG | osa:4332969 dosa:Os03t0378200-01 |
| Entrez-Gene | 4332969 |