RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g26630.2 View Network Show in Genome Browser |
| Other Names | Os03g0383800 |
| Description | SAP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15214213-15219070 Nucleotide Length: 2148 |
| Protein-coding | LOC_Os03g26630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58680 LOC_Os01g24940 LOC_Os01g70020 LOC_Os02g58090 |
| Downstream Genes | LOC_Os07g08729 LOC_Os05g03430 LOC_Os11g29340 LOC_Os07g42760 LOC_Os10g32540 LOC_Os04g54350 LOC_Os03g50980 LOC_Os03g40010 LOC_Os09g39970 LOC_Os03g31070 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g26630.2 |
| Rice Genome Annotation | LOC_Os03g26630.2 |
| Ricechip | LOC_Os03g26630.2 |
| KEGG | osa:4332988 dosa:Os03t0383800-02 |
| Entrez-Gene | 4332988 |