RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g27040.1 View Network Show in Genome Browser |
| Other Names | Os03g0388100 |
| Description | heavy metal-associated domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15479743-15482139 Nucleotide Length: 555 |
| Protein-coding | LOC_Os03g27040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02860 LOC_Os03g17590 LOC_Os02g32814 LOC_Os01g55320 LOC_Os03g26650 LOC_Os01g52160 LOC_Os01g32330 |
| Downstream Genes | LOC_Os08g10480 LOC_Os05g45820 LOC_Os04g56570 LOC_Os07g43040 LOC_Os09g20000 LOC_Os11g05010 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g27040.1 |
| Rice Genome Annotation | LOC_Os03g27040.1 |
| Ricechip | LOC_Os03g27040.1 |
| KEGG | osa:4333006 dosa:Os03t0388100-01 |
| Entrez-Gene | 4333006 |