RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g27320.1 View Network Show in Genome Browser |
| Other Names | Os03g0390700 |
| Description | steroid binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15648901-15652157 Nucleotide Length: 1005 |
| Protein-coding | LOC_Os03g27320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50820 LOC_Os01g64520 LOC_Os01g55500 LOC_Os01g63870 |
| Downstream Genes | LOC_Os07g18158 LOC_Os10g04860 LOC_Os07g07050 LOC_Os03g57680 LOC_Os12g39420 LOC_Os07g18162 LOC_Os08g32500 LOC_Os03g57720 LOC_Os03g57690 LOC_Os07g18120 LOC_Os03g31550 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g27320.1 |
| Rice Genome Annotation | LOC_Os03g27320.1 |
| Ricechip | LOC_Os03g27320.1 |
| KEGG | osa:4333020 dosa:Os03t0390700-01 |
| Entrez-Gene | 4333020 |