RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g27590.1 View Network Show in Genome Browser |
| Other Names | Os03g0393700 |
| Description | OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15823663-15829103 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os03g27590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11440 LOC_Os01g58730 LOC_Os03g03450 LOC_Os01g38510 LOC_Os02g48110 LOC_Os01g59110 LOC_Os01g59100 LOC_Os01g23740 |
| Downstream Genes | LOC_Os08g04180 LOC_Os09g17840 LOC_Os09g17830 LOC_Os08g17680 LOC_Os06g05740 LOC_Os10g38930 LOC_Os06g05520 LOC_Os11g09280 LOC_Os09g27830 LOC_Os05g44360 LOC_Os07g08430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g27590.1 |
| Rice Genome Annotation | LOC_Os03g27590.1 |
| Ricechip | LOC_Os03g27590.1 |
| KEGG | osa:9272686 dosa:Os03t0393700-01 |
| Entrez-Gene | 9272686 |