RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g27780.1 View Network Show in Genome Browser |
| Other Names | Os03g0395100 |
| Description | protein phosphotase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 15932524-15936871 Nucleotide Length: 1335 |
| Protein-coding | LOC_Os03g27780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g17910 LOC_Os02g56560 LOC_Os03g06410 LOC_Os01g43910 LOC_Os01g38950 LOC_Os02g54590 LOC_Os01g56330 LOC_Os01g26280 LOC_Os02g40860 LOC_Os01g51200 LOC_Os03g20380 More.. |
| Downstream Genes | LOC_Os05g32360 LOC_Os03g49750 LOC_Os05g51560 LOC_Os04g43490 LOC_Os10g33650 LOC_Os08g35220 LOC_Os05g06990 LOC_Os06g22810 LOC_Os03g51020 LOC_Os09g21510 LOC_Os05g20150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g27780.1 |
| Rice Genome Annotation | LOC_Os03g27780.1 |
| Ricechip | LOC_Os03g27780.1 |
| KEGG | osa:9270652 dosa:Os03t0395100-01 |
| Entrez-Gene | 9270652 |