RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g27960.1 View Network Show in Genome Browser |
| Other Names | Os03g0397400 |
| Description | sodium/calcium exchanger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16061151-16065169 Nucleotide Length: 1317 |
| Protein-coding | LOC_Os03g27960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08230 LOC_Os02g08010 LOC_Os03g17310 LOC_Os03g21620 LOC_Os02g05630 LOC_Os03g10640 LOC_Os02g24134 LOC_Os01g25189 LOC_Os01g71240 LOC_Os02g34510 LOC_Os01g04260 More.. |
| Downstream Genes | LOC_Os04g51610 LOC_Os10g30070 LOC_Os03g45370 LOC_Os03g53750 LOC_Os11g01580 LOC_Os10g28240 LOC_Os12g42910 LOC_Os07g48290 LOC_Os09g39220 LOC_Os12g04220 LOC_Os11g04460 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g27960.1 |
| Rice Genome Annotation | LOC_Os03g27960.1 |
| Ricechip | LOC_Os03g27960.1 |
| KEGG | osa:4333044 dosa:Os03t0397400-01 |
| Entrez-Gene | 4333044 |