RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g28140.1 View Network Show in Genome Browser
Other Names	Os03g0399532
Description	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 16182022-16192749 Nucleotide Length: 5457
Protein-coding	LOC_Os03g28140

Gene Ontology Classification
GO	Name	Type	Code
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0008289	lipid binding	Molecular Function	IEA
GO:0005768	endosome	Cellular Component	IEA
GO:0005739	mitochondrion	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g54910 LOC_Os03g12300 LOC_Os03g24170 LOC_Os02g01740 LOC_Os03g24160 LOC_Os02g22780 LOC_Os02g14929 LOC_Os01g19480 LOC_Os03g04970 LOC_Os03g25050 LOC_Os03g15550 More..
Downstream Genes	LOC_Os04g46620 LOC_Os07g46490 LOC_Os08g01750 LOC_Os05g05470 LOC_Os12g04700 LOC_Os03g59020 LOC_Os10g32550 LOC_Os03g42220 LOC_Os10g37060 LOC_Os06g34690 LOC_Os11g04840 More..

Pathways
KEGG Pathways	rn00562
Metacyc Pathways	PWY-6352

Database Links
Gramene	LOC_Os03g28140.1
Rice Genome Annotation	LOC_Os03g28140.1
Ricechip	LOC_Os03g28140.1
KEGG	dosa:Os03t0399532-00