RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g28330.5 View Network Show in Genome Browser |
| Other Names | Os03g0401300,Os03g0401366 |
| Description | sucrose synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16301277-16307632 Nucleotide Length: 1704 |
| Protein-coding | LOC_Os03g28330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51840 LOC_Os02g12730 LOC_Os03g14610 LOC_Os03g12250 LOC_Os01g16030 LOC_Os01g71474 LOC_Os02g58720 LOC_Os02g05030 LOC_Os01g27880 LOC_Os02g44320 LOC_Os01g39830 More.. |
| Downstream Genes | LOC_Os06g08080 LOC_Os05g02820 LOC_Os06g42800 LOC_Os07g38590 LOC_Os05g44070 LOC_Os04g52370 LOC_Os07g44350 LOC_Os06g36050 LOC_Os03g44560 LOC_Os07g07230 LOC_Os07g44070 More.. |
| Reference | |
|---|---|
| PubMed | 9063969 1534703 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g28330.5 |
| Rice Genome Annotation | LOC_Os03g28330.5 |
| Ricechip | LOC_Os03g28330.5 |
| KEGG | osa:4333062 dosa:Os03t0401300-01 |
| Entrez-Gene | 4333062 |