RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29150.1 View Network Show in Genome Browser |
| Other Names | Os03g0404800 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16551354-16561073 Nucleotide Length: 876 |
| Protein-coding | LOC_Os03g29150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57990 LOC_Os02g57180 LOC_Os03g07140 LOC_Os02g01920 LOC_Os01g04260 LOC_Os03g18740 LOC_Os03g02710 LOC_Os02g07630 LOC_Os02g51150 LOC_Os02g32490 LOC_Os02g07230 More.. |
| Downstream Genes | LOC_Os07g10600 LOC_Os08g43170 LOC_Os06g25439 LOC_Os06g44270 LOC_Os06g04620 LOC_Os05g34770 LOC_Os07g40580 LOC_Os06g44260 LOC_Os12g32240 LOC_Os09g34960 LOC_Os10g37420 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00520 rn01100 rn01110 |
| Metacyc Pathways | PWY-2582 DTDPRHAMSYN-PWY UDPNACETYLGALSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29150.1 |
| Rice Genome Annotation | LOC_Os03g29150.1 |
| Ricechip | LOC_Os03g29150.1 |
| KEGG | osa:4333070 dosa:Os03t0404800-01 |
| Entrez-Gene | 4333070 |