RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29240.1 View Network Show in Genome Browser |
| Other Names | Os03g0405900 |
| Description | PDI, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16628546-16632077 Nucleotide Length: 1746 |
| Protein-coding | LOC_Os03g29240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05300 LOC_Os01g74110 LOC_Os02g03340 LOC_Os02g03060 LOC_Os01g10340 LOC_Os03g07160 LOC_Os02g16000 LOC_Os02g42700 LOC_Os02g01010 LOC_Os01g07376 LOC_Os03g07190 More.. |
| Downstream Genes | LOC_Os12g07720 LOC_Os06g03720 LOC_Os07g15670 LOC_Os07g08840 LOC_Os06g14620 LOC_Os03g46640 LOC_Os05g37980 LOC_Os05g29010 LOC_Os04g52370 LOC_Os08g10600 LOC_Os12g03720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29240.1 |
| Rice Genome Annotation | LOC_Os03g29240.1 |
| Ricechip | LOC_Os03g29240.1 |
| KEGG | osa:4333077 dosa:Os03t0405900-01 |
| Entrez-Gene | 4333077 |