RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29730.1 View Network Show in Genome Browser |
| Other Names | Os03g0410700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 16937580-16940919 Nucleotide Length: 927 |
| Protein-coding | LOC_Os03g29730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72800 LOC_Os02g38820 LOC_Os01g59080 LOC_Os01g69950 |
| Downstream Genes | LOC_Os04g42870 LOC_Os05g07130 LOC_Os10g10170 |
| Pathways | |
|---|---|
| Metacyc Pathways | ANAEROFRUCAT-PWY PWY-1042 PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29730.1 |
| Rice Genome Annotation | LOC_Os03g29730.1 |
| Ricechip | LOC_Os03g29730.1 |
| KEGG | osa:4333091 dosa:Os03t0410700-01 |
| Entrez-Gene | 4333091 |