RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g29850.1 View Network Show in Genome Browser |
| Other Names | Os03g0411800 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17007955-17011263 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os03g29850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10230 LOC_Os02g41500 LOC_Os02g49800 LOC_Os01g26174 LOC_Os02g02600 LOC_Os03g17780 LOC_Os03g20949 LOC_Os02g37940 LOC_Os03g16500 LOC_Os01g62630 LOC_Os01g26280 More.. |
| Downstream Genes | LOC_Os10g02970 LOC_Os10g30540 LOC_Os04g44910 LOC_Os04g44900 LOC_Os05g25194 LOC_Os08g36420 LOC_Os04g12580 LOC_Os04g12560 LOC_Os06g09340 LOC_Os03g61740 LOC_Os05g47770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g29850.1 |
| Rice Genome Annotation | LOC_Os03g29850.1 |
| Ricechip | LOC_Os03g29850.1 |
| KEGG | osa:4333098 dosa:Os03t0411800-01 |
| Entrez-Gene | 4333098 |