RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g30200.1 View Network Show in Genome Browser |
| Other Names | Os03g0415500 |
| Description | mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17236581-17241081 Nucleotide Length: 627 |
| Protein-coding | LOC_Os03g30200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02390 LOC_Os02g45100 LOC_Os01g06454 LOC_Os01g16910 LOC_Os01g55700 LOC_Os02g53420 LOC_Os03g18500 LOC_Os03g20750 LOC_Os03g02260 LOC_Os02g57220 |
| Downstream Genes | LOC_Os10g37530 LOC_Os07g22700 LOC_Os07g09450 LOC_Os05g43770 LOC_Os03g47300 LOC_Os10g33910 LOC_Os03g56540 LOC_Os05g23720 LOC_Os05g03910 LOC_Os08g25090 LOC_Os09g31486 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g30200.1 |
| Rice Genome Annotation | LOC_Os03g30200.1 |
| Ricechip | LOC_Os03g30200.1 |
| KEGG | osa:4333113 dosa:Os03t0415500-01 |
| Entrez-Gene | 4333113 |