RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g30550.1 View Network Show in Genome Browser |
| Other Names | Os03g0418800 |
| Description | RNA-binding protein-like, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17434387-17438950 Nucleotide Length: 1467 |
| Protein-coding | LOC_Os03g30550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37800 LOC_Os03g09140 LOC_Os01g12730 LOC_Os01g08450 LOC_Os02g43690 LOC_Os01g54590 LOC_Os01g71200 LOC_Os02g02840 LOC_Os02g58730 LOC_Os02g20850 LOC_Os02g50860 More.. |
| Downstream Genes | LOC_Os07g46660 LOC_Os08g42000 LOC_Os07g09680 LOC_Os06g35814 LOC_Os07g31370 LOC_Os05g49890 LOC_Os03g46390 LOC_Os03g46770 LOC_Os12g43600 LOC_Os05g44070 LOC_Os12g43550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g30550.1 |
| Rice Genome Annotation | LOC_Os03g30550.1 |
| Ricechip | LOC_Os03g30550.1 |
| KEGG | osa:4333125 dosa:Os03t0418800-01 |
| Entrez-Gene | 4333125 |