RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g31150.1 View Network Show in Genome Browser |
| Other Names | Os03g0425000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17738066-17741587 Nucleotide Length: 1923 |
| Protein-coding | LOC_Os03g31150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33500 LOC_Os03g17580 LOC_Os01g54540 LOC_Os01g48690 LOC_Os01g03660 LOC_Os03g03360 LOC_Os01g25386 LOC_Os02g04460 LOC_Os02g33450 LOC_Os03g16470 LOC_Os01g59510 More.. |
| Downstream Genes | LOC_Os12g35630 LOC_Os09g10760 LOC_Os11g38030 LOC_Os07g33660 LOC_Os11g26160 LOC_Os08g41990 LOC_Os06g20320 LOC_Os03g45400 LOC_Os07g38300 LOC_Os03g56580 LOC_Os03g60100 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g31150.1 |
| Rice Genome Annotation | LOC_Os03g31150.1 |
| Ricechip | LOC_Os03g31150.1 |
| KEGG | osa:4333151 dosa:Os03t0425000-03 |
| Entrez-Gene | 4333151 |