RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g31180.1 View Network Show in Genome Browser |
| Other Names | Os03g0425300 |
| Description | diacylglycerol kinase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17754817-17761094 Nucleotide Length: 2220 |
| Protein-coding | LOC_Os03g31180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43906 LOC_Os01g57350 LOC_Os03g03400 LOC_Os03g01750 |
| Downstream Genes | LOC_Os10g37280 LOC_Os08g05650 LOC_Os04g45800 LOC_Os07g37580 LOC_Os09g29404 LOC_Os11g37560 LOC_Os03g60610 LOC_Os06g11980 LOC_Os12g12260 LOC_Os04g45730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167d-3p osa-miR167e-3p osa-miR167i-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g31180.1 |
| Rice Genome Annotation | LOC_Os03g31180.1 |
| Ricechip | LOC_Os03g31180.1 |
| KEGG | osa:9266342 dosa:Os03t0425300-01 |
| Entrez-Gene | 9266342 |