RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g31490.1 View Network Show in Genome Browser |
| Other Names | Os03g0428800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 17939618-17942646 Nucleotide Length: 984 |
| Protein-coding | LOC_Os03g31490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02640 LOC_Os02g27030 LOC_Os03g04440 LOC_Os01g48300 LOC_Os03g17660 LOC_Os02g41550 LOC_Os03g04120 LOC_Os01g68330 LOC_Os02g48560 LOC_Os02g44870 LOC_Os03g10860 More.. |
| Downstream Genes | LOC_Os03g41080 LOC_Os06g30310 LOC_Os08g29780 LOC_Os06g24540 LOC_Os09g39560 LOC_Os10g25030 LOC_Os05g33730 LOC_Os12g02120 LOC_Os04g58330 LOC_Os11g02180 LOC_Os04g33940 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5833 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g31490.1 |
| Rice Genome Annotation | LOC_Os03g31490.1 |
| Ricechip | LOC_Os03g31490.1 |
| KEGG | osa:4333169 dosa:Os03t0428800-01 |
| Entrez-Gene | 4333169 |