RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g32040.1 View Network Show in Genome Browser |
| Other Names | Os03g0434400 |
| Description | phenazine biosynthesis protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 18320548-18322755 Nucleotide Length: 861 |
| Protein-coding | LOC_Os03g32040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47940 LOC_Os02g43850 LOC_Os02g11050 LOC_Os02g42230 LOC_Os02g16550 LOC_Os01g13190 LOC_Os02g08480 LOC_Os02g26814 |
| Downstream Genes | LOC_Os04g46930 LOC_Os07g25420 LOC_Os06g43570 LOC_Os04g40290 LOC_Os04g39040 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5527 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g32040.1 |
| Rice Genome Annotation | LOC_Os03g32040.1 |
| Ricechip | LOC_Os03g32040.1 |
| KEGG | osa:4333184 dosa:Os03t0434400-00 |
| Entrez-Gene | 4333184 |