RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g33650.1 View Network Show in Genome Browser |
| Other Names | Os03g0449200 |
| Description | AGO7, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 19243920-19248524 Nucleotide Length: 3147 |
| Protein-coding | LOC_Os03g33650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02970 |
| Downstream Genes | LOC_Os03g38740 LOC_Os05g27000 LOC_Os05g33600 LOC_Os05g33590 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2873c |
| Reference | |
|---|---|
| PubMed | 10409508 10409508 17216479 17804793 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g33650.1 |
| Rice Genome Annotation | LOC_Os03g33650.1 |
| Ricechip | LOC_Os03g33650.1 |
| KEGG | osa:4333232 dosa:Os03t0449200-00 |
| Entrez-Gene | 4333232 |