RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g34040.2 View Network Show in Genome Browser |
| Other Names | Os03g0452300 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 19412908-19417098 Nucleotide Length: 864 |
| Protein-coding | LOC_Os03g34040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12020 LOC_Os03g24020 LOC_Os03g03360 LOC_Os03g15870 LOC_Os01g15290 LOC_Os03g07340 LOC_Os02g04460 LOC_Os02g46440 LOC_Os03g10060 LOC_Os02g27760 LOC_Os01g62210 More.. |
| Downstream Genes | LOC_Os03g54040 LOC_Os03g60100 LOC_Os06g46930 LOC_Os03g61260 LOC_Os03g49710 LOC_Os08g15460 LOC_Os03g48840 LOC_Os05g33020 LOC_Os08g21840 LOC_Os03g51510 LOC_Os03g59720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g34040.2 |
| Rice Genome Annotation | LOC_Os03g34040.2 |
| Ricechip | LOC_Os03g34040.2 |
| KEGG | osa:4333233 dosa:Os03t0452300-01 |
| Entrez-Gene | 4333233 |