RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g36750.1 View Network Show in Genome Browser |
| Other Names | Os03g0565200 |
| Description | cbbY, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 20379616-20387075 Nucleotide Length: 963 |
| Protein-coding | LOC_Os03g36750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70400 LOC_Os01g66000 LOC_Os01g68450 LOC_Os02g34810 LOC_Os02g42570 LOC_Os02g51570 LOC_Os02g53400 LOC_Os01g65460 LOC_Os02g44630 LOC_Os03g32790 LOC_Os01g64270 More.. |
| Downstream Genes | LOC_Os04g55180 LOC_Os08g19140 LOC_Os08g07300 LOC_Os07g46520 LOC_Os04g44650 LOC_Os07g05470 LOC_Os03g39830 LOC_Os05g28090 LOC_Os07g46460 LOC_Os11g47730 LOC_Os08g32930 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-181 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g36750.1 |
| Rice Genome Annotation | LOC_Os03g36750.1 |
| Ricechip | LOC_Os03g36750.1 |
| KEGG | osa:4333266 dosa:Os03t0565200-01 |
| Entrez-Gene | 4333266 |