RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g38210.1 View Network Show in Genome Browser |
| Other Names | Os03g0578900 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21212849-21215801 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os03g38210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g52840 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159d osa-miR2925 osa-miR159a.1 osa-miR159b osa-miR159c osa-miR159e |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g38210.1 |
| Rice Genome Annotation | LOC_Os03g38210.1 |
| Ricechip | LOC_Os03g38210.1 |
| KEGG | osa:4333315 dosa:Os03t0578900-00 |
| Entrez-Gene | 4333315 |