RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g38230.1 View Network Show in Genome Browser |
| Other Names | Os03g0579000 |
| Description | peptidase M50 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21223996-21225936 Nucleotide Length: 1251 |
| Protein-coding | LOC_Os03g38230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63830 LOC_Os01g55360 LOC_Os02g24612 LOC_Os02g03460 LOC_Os01g73450 LOC_Os01g52400 LOC_Os02g10260 LOC_Os01g54900 LOC_Os01g04900 LOC_Os02g52420 LOC_Os02g57060 More.. |
| Downstream Genes | LOC_Os04g41300 LOC_Os10g17990 LOC_Os07g38300 LOC_Os06g07120 LOC_Os12g35630 LOC_Os07g41680 LOC_Os08g25290 LOC_Os04g33300 LOC_Os08g12840 LOC_Os05g36000 LOC_Os11g05570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g38230.1 |
| Rice Genome Annotation | LOC_Os03g38230.1 |
| Ricechip | LOC_Os03g38230.1 |
| KEGG | osa:4333316 dosa:Os03t0579000-01 |
| Entrez-Gene | 4333316 |