RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g38590.1 View Network Show in Genome Browser |
| Other Names | Os03g0582200 |
| Description | secretory carrier-associated membrane protein 4, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21416155-21420550 Nucleotide Length: 942 |
| Protein-coding | LOC_Os03g38590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46080 LOC_Os01g57220 LOC_Os03g01910 LOC_Os02g32740 LOC_Os02g07490 LOC_Os02g47010 LOC_Os03g16000 LOC_Os01g64490 |
| Downstream Genes | LOC_Os06g07200 LOC_Os07g37740 LOC_Os03g63920 LOC_Os05g42330 LOC_Os07g34520 LOC_Os11g16540 LOC_Os03g38600 LOC_Os03g43890 LOC_Os04g50890 LOC_Os10g34180 LOC_Os11g29210 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g38590.1 |
| Rice Genome Annotation | LOC_Os03g38590.1 |
| Ricechip | LOC_Os03g38590.1 |
| KEGG | osa:4333331 dosa:Os03t0582200-01 |
| Entrez-Gene | 4333331 |