RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g38800.1 View Network Show in Genome Browser |
| Other Names | Os03g0584400 |
| Description | AAA family ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21544801-21546790 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os03g38800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os03g05730 LOC_Os03g19990 LOC_Os02g21970 LOC_Os01g62040 LOC_Os03g18690 LOC_Os02g44200 LOC_Os03g31300 |
| Downstream Genes | LOC_Os07g42632 LOC_Os03g60750 LOC_Os09g27270 LOC_Os06g49140 LOC_Os05g49230 LOC_Os07g44410 LOC_Os03g62370 LOC_Os07g08170 LOC_Os10g30580 LOC_Os07g09720 LOC_Os07g49150 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g38800.1 |
| Rice Genome Annotation | LOC_Os03g38800.1 |
| Ricechip | LOC_Os03g38800.1 |
| KEGG | osa:4333339 dosa:Os03t0584400-01 |
| Entrez-Gene | 4333339 |