RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g39610.2 View Network Show in Genome Browser |
| Other Names | Os03g0592500 |
| Description | chlorophyll A-B binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 21999942-22001714 Nucleotide Length: 660 |
| Protein-coding | LOC_Os03g39610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22370 LOC_Os03g09220 LOC_Os01g31690 LOC_Os01g41710 LOC_Os02g10390 LOC_Os03g03910 LOC_Os01g10400 LOC_Os02g02890 LOC_Os03g17070 LOC_Os02g42650 LOC_Os01g72690 More.. |
| Downstream Genes | LOC_Os07g37240 LOC_Os04g33830 LOC_Os07g05480 LOC_Os07g37550 LOC_Os05g48630 LOC_Os04g38410 LOC_Os06g01210 LOC_Os12g19470 LOC_Os12g19381 LOC_Os04g38600 LOC_Os06g15400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g39610.2 |
| Rice Genome Annotation | LOC_Os03g39610.2 |
| Ricechip | LOC_Os03g39610.2 |
| KEGG | osa:4333359 dosa:Os03t0592500-01 |
| Entrez-Gene | 4333359 |