RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40010.1 View Network Show in Genome Browser |
| Other Names | Os03g0596900 |
| Description | DEK C terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22219243-22227221 Nucleotide Length: 2112 |
| Protein-coding | LOC_Os03g40010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56600 LOC_Os01g72800 LOC_Os02g15810 LOC_Os01g03060 LOC_Os03g26630 LOC_Os03g16369 LOC_Os01g54480 LOC_Os01g61550 |
| Downstream Genes | LOC_Os05g18770 LOC_Os11g05556 LOC_Os08g37444 LOC_Os09g39420 LOC_Os05g09620 LOC_Os06g11430 LOC_Os06g10690 LOC_Os04g52960 LOC_Os07g39780 LOC_Os07g16950 LOC_Os04g54350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40010.1 |
| Rice Genome Annotation | LOC_Os03g40010.1 |
| Ricechip | LOC_Os03g40010.1 |
| KEGG | osa:4333378 dosa:Os03t0596900-01 |
| Entrez-Gene | 4333378 |