RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40180.1 View Network Show in Genome Browser |
| Other Names | Os03g0598800 |
| Description | 60S ribosomal protein L15, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22336536-22338324 Nucleotide Length: 615 |
| Protein-coding | LOC_Os03g40180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27760 LOC_Os03g38260 LOC_Os03g21940 LOC_Os02g14059 LOC_Os01g10820 LOC_Os03g37970 LOC_Os02g01332 LOC_Os01g62350 LOC_Os01g54870 LOC_Os01g24690 LOC_Os03g22180 More.. |
| Downstream Genes | LOC_Os07g10720 LOC_Os09g31180 LOC_Os05g11710 LOC_Os06g35730 LOC_Os06g02510 LOC_Os04g52361 LOC_Os04g42380 LOC_Os07g10660 LOC_Os07g05580 LOC_Os08g10608 LOC_Os05g38520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40180.1 |
| Rice Genome Annotation | LOC_Os03g40180.1 |
| Ricechip | LOC_Os03g40180.1 |
| KEGG | osa:4333387 dosa:Os03t0598800-01 |
| Entrez-Gene | 4333387 |