RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40270.1 View Network Show in Genome Browser |
| Other Names | Os03g0599800 |
| Description | alpha-1,4-glucan-protein synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22381320-22383933 Nucleotide Length: 1095 |
| Protein-coding | LOC_Os03g40270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23620 LOC_Os03g37090 LOC_Os02g39200 LOC_Os01g54870 LOC_Os02g09150 LOC_Os02g32030 LOC_Os02g55440 LOC_Os02g37060 LOC_Os03g14450 LOC_Os01g51220 LOC_Os03g40180 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os05g38610 LOC_Os11g24560 LOC_Os12g25690 LOC_Os07g07000 LOC_Os07g48430 LOC_Os08g33370 LOC_Os11g43900 LOC_Os11g26850 LOC_Os07g10830 LOC_Os04g38600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40270.1 |
| Rice Genome Annotation | LOC_Os03g40270.1 |
| Ricechip | LOC_Os03g40270.1 |
| KEGG | osa:4333393 dosa:Os03t0599800-01 |
| Entrez-Gene | 4333393 |