RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40600.1 View Network Show in Genome Browser |
| Other Names | Os03g0603100 |
| Description | cytochrome P450 78A11, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22567670-22568685 Nucleotide Length: 582 |
| Protein-coding | LOC_Os03g40600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43774 LOC_Os01g41810 LOC_Os02g57290 LOC_Os01g43851 LOC_Os01g43750 LOC_Os01g41820 LOC_Os03g04650 LOC_Os01g41800 LOC_Os01g43740 LOC_Os01g43700 LOC_Os01g58970 More.. |
| Downstream Genes | LOC_Os04g48460 LOC_Os12g04100 LOC_Os10g38110 LOC_Os10g38090 LOC_Os06g03930 LOC_Os07g23570 LOC_Os11g29290 LOC_Os11g04290 LOC_Os10g38120 LOC_Os07g44110 LOC_Os05g30890 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40600.1 |
| Rice Genome Annotation | LOC_Os03g40600.1 |
| Ricechip | LOC_Os03g40600.1 |
| KEGG | osa:4333404 dosa:Os03t0603100-00 |
| Entrez-Gene | 4333404 |