RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40670.1 View Network Show in Genome Browser |
| Other Names | Os03g0603600 |
| Description | glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22615886-22619553 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os03g40670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43620 |
| Downstream Genes | LOC_Os04g46880 LOC_Os07g34950 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 |
| Metacyc Pathways | PWY0-381 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40670.1 |
| Rice Genome Annotation | LOC_Os03g40670.1 |
| Ricechip | LOC_Os03g40670.1 |
| KEGG | osa:4333407 dosa:Os03t0603600-01 |
| Entrez-Gene | 4333407 |