RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g40700.1 View Network Show in Genome Browser |
| Other Names | Os03g0603800 |
| Description | presenilin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 22628794-22630343 Nucleotide Length: 1380 |
| Protein-coding | LOC_Os03g40700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15350 LOC_Os02g50360 LOC_Os02g36710 LOC_Os02g17970 |
| Downstream Genes | LOC_Os04g38620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g40700.1 |
| Rice Genome Annotation | LOC_Os03g40700.1 |
| Ricechip | LOC_Os03g40700.1 |
| KEGG | dosa:Os03t0603800-01 |