RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42010.1 View Network Show in Genome Browser |
| Other Names | Os03g0616300 |
| Description | DNA-directed polymerase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23334978-23340914 Nucleotide Length: 1854 |
| Protein-coding | LOC_Os03g42010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g48350 LOC_Os01g59120 LOC_Os02g57290 LOC_Os01g57110 LOC_Os02g42860 LOC_Os03g03650 LOC_Os02g21880 |
| Downstream Genes | LOC_Os04g40290 LOC_Os09g24210 LOC_Os06g47580 LOC_Os06g22080 LOC_Os07g09720 LOC_Os04g45040 LOC_Os03g46640 LOC_Os04g52370 LOC_Os06g07490 LOC_Os08g10600 LOC_Os04g52850 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42010.1 |
| Rice Genome Annotation | LOC_Os03g42010.1 |
| Ricechip | LOC_Os03g42010.1 |
| KEGG | osa:4333450 dosa:Os03t0616300-01 |
| Entrez-Gene | 4333450 |