RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g42110.1 View Network Show in Genome Browser
Other Names	Os03g0617900
Description	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 23438157-23442337 Nucleotide Length: 1248
Protein-coding	LOC_Os03g42110

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005730	nucleolus	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g44000 LOC_Os03g17120 LOC_Os02g47590 LOC_Os01g70300 LOC_Os03g13760 LOC_Os02g01250 LOC_Os03g31690 LOC_Os01g49290 LOC_Os03g19280 LOC_Os02g46520 LOC_Os01g55890 More..
Downstream Genes	LOC_Os12g13320 LOC_Os12g04440 LOC_Os11g04670 LOC_Os03g55280 LOC_Os04g46460 LOC_Os07g20544 LOC_Os07g27780 LOC_Os05g03830 LOC_Os03g63330 LOC_Os11g19770 LOC_Os05g44340 More..

Pathways
KEGG Pathways	rn00300 rn01100 rn01110 rn01120 rn00260 rn00270 rn01210 rn00330
Metacyc Pathways	DAPLYSINESYN-PWY PWY-5097 PWY-2941 HOMOSERSYN-PWY ARGSYNBSUB-PWY GLUTORN-PWY

Database Links
Gramene	LOC_Os03g42110.1
Rice Genome Annotation	LOC_Os03g42110.1
Ricechip	LOC_Os03g42110.1
KEGG	osa:4333458 dosa:Os03t0617900-01
Entrez-Gene	4333458