RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42220.2 View Network Show in Genome Browser |
| Other Names | Os03g0619400 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23485491-23490741 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os03g42220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25050 LOC_Os02g54060 LOC_Os03g22350 LOC_Os02g14929 LOC_Os02g03890 LOC_Os03g22880 LOC_Os03g22740 LOC_Os03g22730 LOC_Os02g22780 LOC_Os02g02410 LOC_Os03g22690 More.. |
| Downstream Genes | LOC_Os04g46620 LOC_Os05g05470 LOC_Os07g44740 LOC_Os09g26730 LOC_Os06g09688 LOC_Os06g09679 LOC_Os06g34690 LOC_Os10g41960 LOC_Os08g22354 LOC_Os04g42600 LOC_Os04g20220 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42220.2 |
| Rice Genome Annotation | LOC_Os03g42220.2 |
| Ricechip | LOC_Os03g42220.2 |
| KEGG | osa:4333462 dosa:Os03t0619400-01 |
| Entrez-Gene | 4333462 |